Statistical lower bounds on protein copy number from fluorescence expression images
by
Lee Zamparo
Theodore J. Perkins
On-line Material
This web page contains links to MATLAB code and data in support of the above mentioned paper. All materials can be downloaded in a single zip file CopyNumber.zip, or may be accessed individually below.
The data
All data is taken originally from the public online FlyEx database. However, it is also presented here as a matter of convenience.
Directory of embryo data used with Binomial estimation method
Directory of embryo data used with Poisson estimation method
Binomial estimation code
Binomial_EstimationScript.m
Binomial_PairingInterface.m
Binomial_PairingInterface_Helper.m
Poisson estimation code
Poisson_EstimationScript.m
Poisson_OptimizeCoords.m
Poisson_Recoordinate.m
Poisson_KNNQuadfit.m
Generic use functions
GeneNameToNum.m
GeneNumToName.m
LoadQuantData.m
LoadQuantData_v2.m
Created Friday, March 27, 2009 by Theodore J. Perkins