Modeling Contaminants in AP-MS/MS Experiments (software)

Discovery of cell compartment specific protein-protein interactions using affinity purification combined with tandem mass spectrometry

Mathieu Lavallee-Adam, Justine Rousseau, Celine Domecq, Annie Bouchard, Denis Faubert, Mathieu Blanchette, Benoit Coulombe

Java Program (with documentation) implenting our Bayesian approach (Decontaminator) to identify false-positive PPIs involving contaminants in MCC-AP-MS/MS experiments: Decontaminator

If you have questions about executing the program, feel free to email us at mathieu.lavallee-adam@mail.mcgill.ca